site-directed mutagenesis

Use this category for questions regarding problems manipulating proteins in molecular biology applications (expression, detection, etc.)

Moderators: mdfenko, leekaming

site-directed mutagenesis

Postby Uofc » Jun 25 2012 11:09 pm

Hi,
I want to mutate the active site of my protein which is Histidine. can anyone suggest if I can do it to asparagine.
Uofc
newcomer
newcomer
 
Posts: 2
Joined: Jun 25 2012 10:56 pm

Re: site-directed mutagenesis

Postby relaxin » Jun 26 2012 1:44 pm

I think it is better to change it into something that is simple and carries no positive charge, such as alanine or glycine.
Not affiliated with any company. Mention of a specifc product does not imply my endorsement of the product. No conflict of interest or guarantee to work on the advice given. Do as I say, not as I do. Not liable to the loss of your valuable samples.
relaxin
PI of Posters
PI of Posters
 
Posts: 6470
Joined: Jan 11 2006 12:40 pm
Location: Mauna Kea

Re: site-directed mutagenesis

Postby CrowSan » Jun 28 2012 5:26 am

For the mutagenesis I would recommend getting a kit if you have not done it before (it is often cheaper to put a kit together yourself later by buying e.g. Dpn1 and taq pol seperately).
I have used QuickChange mutagenisis kits before with good results (not affiliated) although many other kits are available.
The base change from His to Aln is simple (1 base) and it will be the first base of the His codon (i.e. if His = CAT then change it to AAT = Asn, if His = CAC the change to AAC = Asn).

You will need your gene in a plasmid and you will need bacteria.
CrowSan
PI of Posters
PI of Posters
 
Posts: 515
Joined: May 17 2010 7:13 am

Re: site-directed mutagenesis

Postby CrowSan » Jul 02 2012 10:12 am

May have mis-read your question. In short people have mutated His to Asn before, i.e.
http://www.jbc.org/content/261/7/3363.full.pdf
CrowSan
PI of Posters
PI of Posters
 
Posts: 515
Joined: May 17 2010 7:13 am

Re: site-directed mutagenesis

Postby morkfromork » Aug 15 2012 12:14 pm

CrowSan wrote:For the mutagenesis I would recommend getting a kit if you have not done it before (it is often cheaper to put a kit together yourself later by buying e.g. Dpn1 and taq pol seperately).
I have used QuickChange mutagenisis kits before with good results (not affiliated) although many other kits are available.
The base change from His to Aln is simple (1 base) and it will be the first base of the His codon (i.e. if His = CAT then change it to AAT = Asn, if His = CAC the change to AAC = Asn).

You will need your gene in a plasmid and you will need bacteria.


I can also recommend QuickChange, it is efficient and straight-forward. I learned SDM by doing 4 primer recombination PCR which requires a number of steps and can be fiddley. The kit works in one day (plus the time needed to miniprep the bacteria).
morkfromork
supertech
supertech
 
Posts: 87
Joined: Jun 30 2011 3:49 pm


Return to Protein Methods

Who is online

Users browsing this forum: No registered users and 2 guests